CDS

Accession Number TCMCG034C42506
gbkey CDS
Protein Id XP_028956803.1
Location join(6691791..6691797,6702104..6702280,6702399..6702512,6702975..6703234,6703454..6703702,6703811..6703972,6704608..6704745,6704872..6705108,6705598..6705725,6706146..6706269,6708040..6708201,6709199..6709346,6709441..6709541,6710058..6710219,6710529..6710576,6710920..6711027,6711156..6711230,6711780..6711830,6712988..6713131,6713234..6713364,6713879..6713966,6714969..6715028,6715102..6715354,6715653..6715804,6715911..6715981,6716875..6717031,6717144..6717311)
Gene LOC103445282
GeneID 103445282
Organism Malus domestica

Protein

Length 1224aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA534520
db_source XM_029100970.1
Definition uncharacterized protein LOC103445282 isoform X3 [Malus domestica]

EGGNOG-MAPPER Annotation

COG_category A
Description tRNA rRNA methyltransferase (SpoU) family protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K15333        [VIEW IN KEGG]
EC 2.1.1.34        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000451        [VIEW IN EMBL-EBI]
GO:0000453        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008171        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008175        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016423        [VIEW IN EMBL-EBI]
GO:0016435        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030488        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070039        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCGAGCTGCTTGTCAAGTTCGTACAGATAATAATGAAAGTGAAGGACAGTGGCTTGAAGATGTGATTCCTGGCATGATCCAAGTGGAAAGTGTTCCCAATGACAAAGTTGTTCTACTTGATGCACTGAGATTTCTTATCGAGAGCAGCAAACAACATTTCAATCCTAATTATCGCCTTCGAGTTTGTGAGAAAATCCTGGAGTCCGCTACCTCAGTGGTGTGTGCATGTGATCTCCCTCTTGACATACTTATGCACTTCATTTCAACATTTCCTTGGGAATTTACCGACTTCGGTGGTTCCTTAAGAGTGAAATTACAAGAATGGCTTATGGGGTGTAGTAAGAAGAATTGTTATGGCAACTGCTGCAGTACTGAGACGAAGCTTCTAAAGGGTCTCCATGAATTCCCCAGTAGTTTTACAGTTCATTATTCAGTTGATAGTTCCATCACTTTTGATGATGAAGACTTGGAATCCTGGGAATTTGAAGCGAAGCGGTGGGCACGAGTGCTTTTTCTTACATGCCAGGAGGAATATCAATTGATACCTACACTGATGTTTATTCAAACTCATGCTCTTGGTCTCTGCCAAGAAAACAACAATTTGGATCAAATTCCTGTGAAGTTTCTCATTGTCACTTTGAGCTTGGTGCGGGAGCTTCAGATGATGCAAGACAGAGTCGCTGAATATAGATCTACAGTTAGAACCAAATCAGAATCTCGTGCGCTTGAATTAATGGATCAATTTGGTCATCCAGATGCTCTTAACTTATACCAGAAGTTTACCAATGTTTTTATTGTTATAATGAAGGAGTTGGTGTCTTTGGCAAACTTGTCCTGTTCTATATTCTCACATGCCAATACCACTAAGATGGCAGATGCCAGCCTTCCTGGTTCAGTGAAAGGAAAACTTGGAGGCCCTAGTCAACGCCGTTTGTCATCCTCTACCACCACTGCTGTGTTGCAAGCGATAATTTCCATGAAGGCTCTTGCAACTATCTCATCATGGTGTGCACAATTTATAGCTGATGCATCACTTGATCTTGCTTTTAATTTTATGTGGGAATTCTACTGGAAAACTGTTTCATCTCCAGTTACTGATTCAGAGACTGGGGCGGAAATAAGTCTTGCAGCATATGAAGCATTAGCTCCTGCTCTCACAGCACTAGTGTCTATGTTTTCTCCTAAATCGTTGGATCTTGTCAAGAACAATGGCAATCTGTTTCTATCAGATGGAAAACCTCTGTTAGATTCCTTGGTTCTTTCTTTTCTTCAGAACATAAATAATCTCCTAGCAATTGGAGTATTTGTACGGACTCGACGTGCAGTTTTAATGAATTGGAAGTGGATTTGCCTAGAATCTCTACTGTCAATTCCTTGCTATGCTTTAAAAAAAGGGCTTCATTTAGAGGACAATACTTTTTTGCTCTCAGGTGATACTCTCAGATTGATTTTTACTGATCTTCTTGAGAGCCTAGAGAATGCTGGAGAAAATTCTGTTCTACCAATGCTCAGATCTGTCCGATTAGTTTTGGGCCTATTGTCCGAGGGAAAGTCTGGTTCACTTGTCTATTCATGTGATGGGGTGGATGCCCAGATGATGTGGCAGTTGGTTCAGTCTTCTTGGATTTTGCATGTCAGTTGTAACAAGAGGAAGGTTGCACCTATTGCTGCACTTTTGTCTTCTGTTCTGCATTCATCCCTATTTAGTGATGAGAGCATGCATATGAATGACAATGCACCTGGGCCTCTGAAGTGGTTTGTTGAGAAAATTCTGGAGGAAGGCACAAAAAGTCCCCGCACAATTCGTCTTGCTGCATTACACTTAACGGGCCTCTTTCTATCATATCCTAGGATTATAAAGTACTATGTGAAGGAGTTGAAGCTGCTGTCACTACATGGTTCTGTTGCATTCGATGAGGACTTTGAAGGTGAATTAGCTGACAATCATGATACAAGGACTGAAGTTTCTTTATTGGCGAAAGGCCCTGATCCTGAGCTTACCAAAGAATTTATCAACACAGAATTGTATGCACGTGCCTCTGTTGCTGTTCTGTTTTACAAGCTAGCAGACTTGTCTGATATGGTGGGATCACCAAATGAAAATGAAGATTGCCATGCAGCTTTGGAATCTGGAAAAATATTTTTGCTTGAGCTTCTAGATTCTGCGGTAAACGACAAGGATCTTTCGAAAGAGCTGTATAAGAAATACAGTGCAATCCACAGGCGTAAGGTACGTGCGTGGCAAATGATATGTATTTTGTCACGTTTCATATGTCAAGATATAGTTTCTGAAGTTTCACGTTGCCTGCACATATGCCTTTATATGAACAATTTACCTGCAGTTCGTCAATACTTGGAAACATTCGCAATTAATATGTACTTGAAGTTCCCATCATTGGTTGGGGAGCAACTAGTCCCTGTATTAAGAGATTATGAGATGAGGCCTCAGGCGCTCTCTTCATATGTATTTATAGCAGCCAATGTCATCCTCCATGCATCTCAAGCTGTTCAAGACAAGCATTTGAATGAATTACTTCCTCCTATATTTCCACTACTAACATCCCATCACCACAGTTTGCGTGGTTTCGCCCAGTTATTGGTTTACCAAGTTCTCTGCAAATTGTTTCCTCCATTGGACTCTAGGGCCTCTGGAACTATGACTTTAGAGAAGAGGTGTTTTGAGGATTTGAAATCCTACCTGGCAAAGAACTATGATTGTGTGCGCCTACGAGCATCAATGGGAGGATTTCTTGATGCCTACAGTCCCAGTAGCTCTGTCACTCCTGCTGGGATTTTCATCAACCGGGTTGAGGCACTCGAGTTTGAATGTGTACCAGTGTCACTTACGGAGCAAGTGCTCAACTTTTTAAATGATGTCAGGGAAGATCTTCGGAGTTCAATGGCAAAAGATGCTGCGGCTATTAAGAATGAAAGCTTAAGATCTGATGAAGATCAAAATTGCATAGCAATACCATCTAATGCAAATGAAGGAAACTCACATACCCAGCAGCCCAAAGATATTTCACTGGATTTTCAAAAAAAGATTACCCTCTCTAAACATGAGAAGCATGATATAGCCGTAAATTCCTTCTTTGGCAACCAAGACACTTACAAACCACTTGAAGAAATGGAGAAGGAAGATAAGCTTCTTGCTCAGGTGCTGCAGTCTAGAAGTCAGGCAATGGAAAGAGAGAGAGCAAGCAGACAACAACTCATTCTTGTGGCATCTCTTCTTGATCGCATACCTAACCTTGCTGGCCTGGCACGGACTTGTGAGGTGTTTAAGGTGTCGGGTTTGGCTGTTGCGGATGCAAACGTAGTACATGACAAACAGTTCCAGCTCATCAGTGTGACTGCAGAAAAGTGGGTTCCTATCATTGAAGTCCCAGTGGATAGTTTGAAGGTCTTCCTTGAGAGAAAGAAACGAGAAGGCTTTTCAATTTTGGGACTGGAGCAAACTGCAAATAGTGTACCGCTTGACCAGTATAGCTTTCCTAAAAAGACGGTACTAGTCCTTGGGCGTGAAAAGGAAGGTATACCGGTGGATATCATTCATATTCTGGATGCTTGCATTGAGATTCCACAGTTGGGAGTTGTTAGATCTTTAAATGTTCATGTCAGCGGTGCCATTGCGCTGTGGGAGTATACTCGACAGCAGAGATCATCCCAGTAG
Protein:  
MRAACQVRTDNNESEGQWLEDVIPGMIQVESVPNDKVVLLDALRFLIESSKQHFNPNYRLRVCEKILESATSVVCACDLPLDILMHFISTFPWEFTDFGGSLRVKLQEWLMGCSKKNCYGNCCSTETKLLKGLHEFPSSFTVHYSVDSSITFDDEDLESWEFEAKRWARVLFLTCQEEYQLIPTLMFIQTHALGLCQENNNLDQIPVKFLIVTLSLVRELQMMQDRVAEYRSTVRTKSESRALELMDQFGHPDALNLYQKFTNVFIVIMKELVSLANLSCSIFSHANTTKMADASLPGSVKGKLGGPSQRRLSSSTTTAVLQAIISMKALATISSWCAQFIADASLDLAFNFMWEFYWKTVSSPVTDSETGAEISLAAYEALAPALTALVSMFSPKSLDLVKNNGNLFLSDGKPLLDSLVLSFLQNINNLLAIGVFVRTRRAVLMNWKWICLESLLSIPCYALKKGLHLEDNTFLLSGDTLRLIFTDLLESLENAGENSVLPMLRSVRLVLGLLSEGKSGSLVYSCDGVDAQMMWQLVQSSWILHVSCNKRKVAPIAALLSSVLHSSLFSDESMHMNDNAPGPLKWFVEKILEEGTKSPRTIRLAALHLTGLFLSYPRIIKYYVKELKLLSLHGSVAFDEDFEGELADNHDTRTEVSLLAKGPDPELTKEFINTELYARASVAVLFYKLADLSDMVGSPNENEDCHAALESGKIFLLELLDSAVNDKDLSKELYKKYSAIHRRKVRAWQMICILSRFICQDIVSEVSRCLHICLYMNNLPAVRQYLETFAINMYLKFPSLVGEQLVPVLRDYEMRPQALSSYVFIAANVILHASQAVQDKHLNELLPPIFPLLTSHHHSLRGFAQLLVYQVLCKLFPPLDSRASGTMTLEKRCFEDLKSYLAKNYDCVRLRASMGGFLDAYSPSSSVTPAGIFINRVEALEFECVPVSLTEQVLNFLNDVREDLRSSMAKDAAAIKNESLRSDEDQNCIAIPSNANEGNSHTQQPKDISLDFQKKITLSKHEKHDIAVNSFFGNQDTYKPLEEMEKEDKLLAQVLQSRSQAMERERASRQQLILVASLLDRIPNLAGLARTCEVFKVSGLAVADANVVHDKQFQLISVTAEKWVPIIEVPVDSLKVFLERKKREGFSILGLEQTANSVPLDQYSFPKKTVLVLGREKEGIPVDIIHILDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRSSQ